Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947501.1_cds_XP_016489174.1_79728
CDS Infomation

[gene=LOC107809091] [db_xref=GeneID:107809091] [protein=polyadenylate-binding protein 3-like] [protein_id=XP_016489174.1] [location=complement(join(26754..26978,27086..27289,27785..28075,29173..29262,29357..29434,29525..30300,30864..31173))] [gbkey=CDS]
Sequence

ATGGCGGCGACGGCGGTTCCGCCACCGGCTGTGCAAACTCAGGCGGAAACGACGGCGGTC
GGAGCGACACCACCGCCGACTCCGCAGATGGCAATGGGAGGTGATGGTAACGGTAGTGGT
GGTGTTGGTGTGACGACGAGTACGAACTATGCCCTGTACGTAGGGGATCTGGACACGTCA
GTGGAAGAAGGACAACTATATGAGGTGTTTAACCACGTGGCACAAGTCGTGTCCGTTAGG
GTTTGCAGGGATCAATCGGGCCGGTGCTCCCTCGGTTACGCTTACGTCAATTTCACTTCT
CCACAAGATGCTGCTACTGCTAGGGAGTTATTAAATTTTACTCAGTTGAATGGAAAACCT
ATGAGGATAATGTTTTCTCATAGAGACCCTAGTCTGCGGAAGAGCGGATATGCAAATGTT
TTCATTAAGAATCTGGACTCGTCAATTGATAACAAGGCGTTGTATGACACTTTTGCTGCC
TTTGGAACGGTTCTTTCCTGCAAGGTAGCTGTTGATAGTAATGGTCAGTCAAAAGGATAT
GGATTTGTACAATTTGATCAGGACGAAGCTGCACACAATGCAATCAAGCGTCTAAATGGT
ATGTTGATAAATGATAAACAAGTCTATGTTGGCCACTTCATCCGTCGACAAGAAAGGAGT
CAAGCAAATGCCTCTGATAAATTCACAAATGTGTATGTGAAAGACCTTCCTGAAACTACC
ACTGATGAGGATCTTAAGAAGCTTTTTGAGAAGTATGGAACCATCACCAGTGCTGTAGTT
ATGAAAGACAAAAATGGGAAGTCCAAGTGTTTTGGCTTCGTCAATTATGAGAGCTCGGAT
GCTGCAGCCTCTGCTGTTGAACAGTTGAATGGCAGTTCCTTCAAAGAAAAAGTTCTGTAT
GTAGGCAAGGCCCAGAAGAAATCAGAACGGGAAGCAGAACTGAAAGCCAAATTCGAACAA
GAAAGAGCTAGTCGATTTGAGAAACTAAAAGGTGCTAACTTGTATTTAAAAAATCTCGAT
GACAGTGTGAATGATGAAAATCTGAAAGGGTTATTCTCGGAGTACGGAACCATAACGTCC
TGCAAGGTGATGCGCGACTCAAAAGGGGTGAGCAAGGGTTCTGGCTTTGTTGCCTTCTCC
ACCCCCGAGGAAGCTACACGAGCTTTGAACGAAATGAATGGCAAGTTGATAGGAAAGAAA
CCTTTATTTGTTGCTGCTGCCCAGCGCAAGGATGAAAGAAGGGCATGGCTACAGGCACAT
TTTGCTCGGATGCGACCAGCTGGGGGGATGGCTCCTCCTCCTGGACCTATGCCTGGGTTT
CACAATGGGGCACCTCGACTTGTTCCTCAGCAGGTCTACTTTGGTCAAGGTGCCCCAGGA
CTTATAGCACCTCAAGCCGCTGGATTTGGCTTCCAGCAACAACTCATGCCTGGACTTCGT
CCAGGTGTTGGCCCGAATTTCCTCTTGCCCTATCAGCTTCAGCGTCAAGGACAACACGGA
CGTGTTGGTGGAAGGAGAGGAGGGAATTCTCAACAGCAGCAGCAGTGGAACTCCGGTAGA
TTCAATCCCAATGGACGAAATGGCAGGCATCCTAGCATCACTCAAGGTATAATGGAACCA
ATTATGCCAGCGCCATTTGATGCTTCTGCTATGACAACATCTGCGTTGGACATCCAACGC
ACTAACCCAGTTCCACCATCAACACTTGCTTCTTCTTTGGCCTTTGCTTCTCCAGAAGAT
CAGCATCGGATGCTTGGAGAGCAGTTATTTCCACTTGTGGAATGCATTGAACGTGATCAT
GCTAGTAAAGTTACTGGGATGTTGCTTGAGATGGATCAAACTGAGGTGCTTCATCTCATC
GAGTCCCCTGATGCGCTCAATAAGAAAGTTTCCGAGGCTATGGATGTTCTTCGCATAGCA
AGGCCAGGTTCTAGTGTTGGTGACAAATTTGGATCTCTCACCCTGAATGGATGA

Peptide Sequence

PEP ID

XP_016489174.1
PEP Infomation

PREDICTED: polyadenylate-binding protein 3-like [Nicotiana tabacum]
Sequence

MAATAVPPPAVQTQAETTAVGATPPPTPQMAMGGDGNGSGGVGVTTSTNYALYVGDLDTS
VEEGQLYEVFNHVAQVVSVRVCRDQSGRCSLGYAYVNFTSPQDAATARELLNFTQLNGKP
MRIMFSHRDPSLRKSGYANVFIKNLDSSIDNKALYDTFAAFGTVLSCKVAVDSNGQSKGY
GFVQFDQDEAAHNAIKRLNGMLINDKQVYVGHFIRRQERSQANASDKFTNVYVKDLPETT
TDEDLKKLFEKYGTITSAVVMKDKNGKSKCFGFVNYESSDAAASAVEQLNGSSFKEKVLY
VGKAQKKSEREAELKAKFEQERASRFEKLKGANLYLKNLDDSVNDENLKGLFSEYGTITS
CKVMRDSKGVSKGSGFVAFSTPEEATRALNEMNGKLIGKKPLFVAAAQRKDERRAWLQAH
FARMRPAGGMAPPPGPMPGFHNGAPRLVPQQVYFGQGAPGLIAPQAAGFGFQQQLMPGLR
PGVGPNFLLPYQLQRQGQHGRVGGRRGGNSQQQQQWNSGRFNPNGRNGRHPSITQGIMEP
IMPAPFDASAMTTSALDIQRTNPVPPSTLASSLAFASPEDQHRMLGEQLFPLVECIERDH
ASKVTGMLLEMDQTEVLHLIESPDALNKKVSEAMDVLRIARPGSSVGDKFGSLTLNG

Transcript Sequence

Gene sequence data has not been registered.